Where to go for more information?

Fusarium genome pages

MIPS This database contains the latest gene calls for F. graminearum and is being updated continuously.

Broad (MIT) F. graminearum, F. verticillioides and F. oxysporum genomes with latest annotations, supported by GeneChip data (Affymetix data)

Nectria haematococcus genome with annotations.

NCBI All fully sequenced filamentous fungi (both annotated and unannotated)


 

Expression data

EST-data:     Cogeme

Affymetix (GeneChip Data):    PlexDB

Gene prediction programs

Softberry:                 http://linux1.softberry.com/berry.phtml

            FGENESH          HMM based gene structure prediction
            FGENESH+        HMM plus similar protein-based gene prediction
            FGENESH_C     HMM plus similar cDNA-based gene structure prediction
            FGENESH-2       HMM gene prediction using two genomic sequences of close organisms
 

Augustus:                http://augustus.gobics.de/